Job Description P0A6D7 Confidence 99.75% Date Thu Jan 5 11:02:54 GMT 2012 Rank 24 Aligned Residues 153 % Identity 24% Template c3r8cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cytidylate kinase (cmk) from mycobacterium2 abscessus Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	F	L	V	G	P	M	G	A	G	K	S	T	I	G	R	Q	L	A	Q	Q	L	N	M	E	F	Y	D	S	D	Q	E	I	E	K	R	T	G	A	D	V	G	W	V	F	D	L	E	G	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	V	D	G	P	S	G	T	G	K	S	S	V	A	K	E	L	A	R	Q	L	G	A	S	Y	L	D	T	G	A	M	Y	R	I	V	T	L	W	V	L	R	A	G	V	D	L	T	D	P	A	A	I	A	A	A	T	D	Q	V	P	M	S	V	S	S	D	P	D	A	Q	T	A	L	L	A	G	E	D
Template Known Secondary structure									S	S	S	S												T	T																					T			T	T								T	T	T	T									T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																								59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	D	R	E	E	K	V	I	N	E	L	T	E	K	Q	G	I	V	L	A	T	G	G	G	S	V	K	S	R	E	T	R	N	R	L	S	A	R	G	V	V	V	Y	L	E	T	T	I	E	K	Q	L	A	R	T	Q	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		V	S	V	P	I	R	G	N	E	V	T	G	A	V	S	A	V	S	A	V	P	A	V	R	E	R	L	V	R	Q	Q	R	E	L	A	E	S	S	G	A	V	V	V	E	G	R	D	I	G	T	.	.	.	.	.	V	V	L	P	D	A	D	V	K	I	Y	L	T	A	S	A	Q	A	R	A	Q	R	R	N	L
Template Known Secondary structure			T	T	G	G	G	S												T	S																	T	T	S	S					S	S	S				.	.	.	.	.				T	T		S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	R	P	L	L	H	V	E	T	P	P	R	E	V	L	E	A	L	A	N	E	R	N	P	L	Y	E	E	I	A	D	V	T	I	R	T	D	D	Q	S	A	K	V	V	A	N	Q	I	I	H	M	L	E	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		A	D	.	.	.	.	.	.	.	.	.	V	Q	R	R	D	H	L	D	S	T	R	A	V	S	P	L	R	P	A	E	D	A	L	E	V	D	T	S	D	M	T	Q	E	Q	V	V	A	H	L	L	D	L	V	R	T
Template Known Secondary structure				.	.	.	.	.	.	.	.	.												S	S	S						T	T							T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.										.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions