Job Description P0A6D7 Confidence 97.59% Date Thu Jan 5 11:02:54 GMT 2012 Rank 233 Aligned Residues 91 % Identity 19% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		A	E	K	R	N	I	F	L	V	G	P	M	G	A	G	K	S	T	I	G	R	Q	L	A	Q	Q	L	.	.	.	.	.	N	M	E	F	Y	D	S	D	.	.	.	.	.	.	.	Q	E	I	E	K	R	T	G	A	D	V	G	W	V	F	D	L	E	G	E	E	G	F	R	D	R	E	E	K	V	I	N	E
Query Conservation																													.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	P	T	I	L	L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K	E	G	V	D	Y
Template Known Secondary structure		S	S	S									T	T	S	S														T	T	T											S	S	T											G	G	G	T							T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	T	E	K	Q	.	.	G	I	V	L	A	T	G	G	G	S	V	K	S	R	E	T	R	N
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		F	K	S	K	G	V	D	I	I	I	V	D	T	A	G	R	H	K	E	D	K	A	L	I	E
Template Known Secondary structure					T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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