Job Description P0A6D7 Confidence 99.65% Date Thu Jan 5 11:02:54 GMT 2012 Rank 59 Aligned Residues 170 % Identity 18% Template c2plrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thymidylate kinase; PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7 Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.	.	.																.	.	.	.	.	.
Query SS confidence																												.	.	.																.	.	.	.	.	.
Query Sequence		E	K	R	N	I	F	L	V	G	P	M	G	A	G	K	S	T	I	G	R	Q	L	A	Q	Q	L	.	.	.	N	M	E	F	Y	D	S	D	Q	E	I	E	K	R	T	.	.	.	.	.	.	G	A	D	V	G	W	V	F	D	L	E	G	E	E	G	F	R	D	R	E	E	K	V	I	N	E	L	T	E	K
Query Conservation																												.	.	.																.	.	.	.	.	.
Alig confidence																												.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	V	L	I	A	F	E	G	I	D	G	S	G	K	S	S	Q	A	T	L	L	K	D	W	I	E	L	K	R	D	V	Y	L	T	E	S	D	W	I	H	D	I	I	K	E	A	K	K	K	D	L	L	T	P	L	T	F	S	L	I	H	A	T	D	F	S	D	R	Y	E	R	Y	I	L	P	X	L	K	S
Template Known Secondary structure												T	T	S	S													T	T	T	S																				T	T																						T							T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		74	.	.	.	.	.	80	.	.														.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	I	V	L	A	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	V	K	S	R	E	T	R	N	R	L	S	A	R	G	V	V	V	Y	L	E	T	T	I	E	K	Q	L	A	R	T	Q	R	D	K	K	R	P	L	L	H	V	E	T	P	.	.	.	.	.	.	.	.	.	.	P	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	I	V	I	S	D	R	Y	I	Y	T	A	Y	A	R	D	S	V	R	G	V	D	I	D	W	V	K	K	L	Y	S	F	A	I	K	P	D	I	T	F	Y	I	R	V	S	P	D	I	A	L	E	R	I	K	K	S	K	R	K	I	K	P	Q	E	A	G	A	D	I	F	P	G	L	S	P	E	E	G	F
Template Known Secondary structure		T						S	S											T	T	T										T	T	T	S				S																	T	T	T	T					T	T	T	T	T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	E	A	L	A	N	E	R	N	P	L	Y	E	E	I	A	D	V	T	I	R	T	D	D	Q	S	A	K	V	V	A	N	Q	I	I	H	M	L	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Y	Q	G	L	I	T	E	V	Y	D	K	L	V	K	D	E	N	F	I	V	I	D	G	T	K	T	P	K	E	I	Q	I	Q	I	R	K	F	V	G	E
Template Known Secondary structure																T	T	T	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions