Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6D7
Confidence98.88%DateThu Jan 5 11:02:54 GMT 2012
Rank125Aligned Residues116
% Identity16%Templatec2p5tD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:pezt; PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20........ .30........ .40.........50.........60.........70...
Predicted Secondary structure 









..




......






Query SS confidence 


























. .









. . . . . .


































Query Sequence  AEKRNIFLVGPMGAGKSTIGRQLAQQL. . NMEFYDSDQE. . . . . . IEKRTGADVGWVFDLEGEEGFRDREEKVINELTEK
Query Conservation       
 
 
  







  

  
..
   
  
  ......                                   
Alig confidence 


























..









......


































Template Conservation    
  


 










  

         
  
                              
  
  
      
Template Sequence  KQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTKDFAGKMVESLVTKLSSLG
Template Known Secondary structure  SS
S
TTS
TTTT


GGGGGGGSTTTTTTT
Template Predicted Secondary structure 


















Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.........
 
   74.....80........ .90.........100.........110.......
Predicted Secondary structure 








....







Query SS confidence 














. . . .




























Query Sequence  QGIVLATGGGSVKSR. . . . ETRNRLSARGVVVYLETTIEKQLARTQRD
Query Conservation     
           ....            
           
   
Alig confidence 














....




























Template Conservation       
            
           
       
        
Template Sequence  YNLLIEGTLRTVDVPKKTAQLLKNKGYEVQLALIATKPELSYLSTLIR
Template Known Secondary structure 



TTSSTTT



Template Predicted Secondary structure 















Template SS confidence 















































   110.........120.........130.........140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions