Job Description P0A6D7 Confidence 99.57% Date Thu Jan 5 11:02:54 GMT 2012 Rank 71 Aligned Residues 161 % Identity 17% Template c2ccjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																										.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	F	L	V	G	P	M	G	A	G	K	S	T	I	G	R	Q	L	A	Q	Q	L	.	.	N	M	E	F	Y	D	S	D	Q	E	I	E	K	R	T	G	A	D	V	G	W	V	F	D	L	E	G	E	.	.	.	.	.	.	.	.	.	.	.	.	E	G	F	R	D	R	E	E	K	V	I	N	E	L
Query Conservation																										.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	I	T	F	E	G	P	E	G	S	G	K	T	T	V	I	N	E	V	Y	H	R	L	V	K	D	Y	D	V	I	M	T	R	E	P	G	G	V	P	T	G	E	E	I	R	K	I	V	L	E	G	N	D	M	D	I	R	T	E	A	M	L	F	A	A	S	R	R	E	H	L	V	L	K	V	I	P	A	L
Template Known Secondary structure										T	T	S														T	T	T	S							S	S	T	T													T		S	S																					T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	K	Q	G	I	V	L	A	T	G	G	G	S	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	E	T	R	N	R	L	S	A	R	G	V	V	V	Y	L	E	T	T	I	E	K	Q	L	A	R	T	Q	R	D	K	K	R	P	L	L	H	V	E	T	P	P	R	E	V	L	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		K	E	G	K	V	V	L	C	D	R	Y	I	D	S	S	L	A	Y	Q	G	Y	A	R	G	I	G	V	E	E	V	R	A	L	N	E	F	A	I	N	G	L	Y	P	D	L	T	I	Y	L	N	V	S	A	E	V	G	R	E	R	I	I	K	N	S	N	R	.	.	.	.	L	D	Q	E	D	L	K	F	H	E
Template Known Secondary structure			T	T							S									T	T	T	T	T	S	S														T	T				S																			T				.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	N	E	R	N	P	L	Y	E	E	I	A	D	V	T	I	R	T	D	D	Q	S	A	K	V	V	A	N	Q	I	I	H	M	L	E	S
Query Conservation
Alig confidence															.	.								.
Template Conservation															.	.								.
Template Sequence		K	V	I	E	G	Y	Q	E	I	I	H	R	F	.	.	K	S	V	N	A	D	Q	.	P	L	E	N	V	V	E	D	T	Y	Q	T	I	I	K
Template Known Secondary structure															.	.					T	T	S	.
Template Predicted Secondary structure															.	.								.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions