 |
Job Description | P15081 | Confidence | 5.45% | Date | Thu Jan 5 11:34:37 GMT 2012 |
Rank | 34 | Aligned Residues | 32 |
% Identity | 16% | Template | c2jt1A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:pefi protein; |
PDBTitle: solution nmr structure of pefi (plasmid-encoded fimbriae regulatory)2 protein from salmonella typhimurium. northeast structural genomics3 target str82
|
Resolution | UNK |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
L | G | G | W | Q | I | S | R | F | N | R | A | F | D | T | L | C | Q | Q | G | R | V | G | V | G | R | . |
S | S | G | R | F | K |
Query Conservation |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   | . |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
Template Sequence |   |
L | S | I | Y | Q | V | R | L | Y | L | E | Q | L | H | D | V | G | V | L | E | K | V | N | A | G | K | G | V | P | G | L | W | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | S |
| S | S | S | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|