Return to main results Retrieve Phyre Job Id

Job DescriptionP15081
Confidence2.18%DateThu Jan 5 11:34:37 GMT 2012
Rank89Aligned Residues21
% Identity33%Templatec1q0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110........
Predicted Secondary structure 




Query SS confidence 























Query Sequence  QPDVIFPHDPLSQNALSLALKLKR
Query Conservation           
    

  
   
 
Alig confidence 



...
















Template Conservation 



...
















Template Sequence  YPED. . . EEELIRKAIELSLKESR
Template Known Secondary structure 


...GG
Template Predicted Secondary structure 



...
Template SS confidence 























   255... .260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions