Job Description P31447 Confidence 99.13% Date Thu Jan 5 11:47:37 GMT 2012 Rank 33 Aligned Residues 242 % Identity 24% Template c3e2dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase Resolution 1.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																			.												.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.																			.												.	.	.
Query Sequence		K	R	P	N	F	L	F	V	M	T	D	T	Q	A	T	N	M	V	G	C	Y	.	.	.	.	.	.	.	.	.	S	G	K	P	L	N	T	Q	N	I	D	S	L	A	A	E	G	I	.	R	F	N	S	A	Y	T	C	S	P	V	.	.	.	C	T	P	A	R	A	G	L	F	T	G	I	Y	A	N	Q	S
Query Conservation																							.	.	.	.	.	.	.	.	.																			.												.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																			.												.	.	.
Template Conservation
Template Sequence		E	I	K	N	V	I	L	M	I	G	D	G	M	G	P	Q	Q	V	G	L	L	E	T	Y	A	N	Q	A	P	N	S	I	Y	K	G	N	K	T	A	I	Y	Q	L	A	Q	E	G	V	I	G	S	S	L	T	H	P	E	D	A	I	V	V	D	S	A	C	S	A	T	M	L	A	T	G	I	Y	S	S	S	E
Template Known Secondary structure																														T	T		T	T	T	T												S										T	T	S	S	S													S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	W	T	N	N	V	A	P	G	K	N	I	S	T	M	G	R	Y	F	K	D	A	G	Y	H	T	C	Y	I	G	K	W	H	L	D	G	H	D	Y	F	G	T	G	E	C	P	P	E	W	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		V	I	.	.	G	I	D	S	Q	G	N	H	V	E	T	V	L	E	K	A	K	K	A	G	K	A	T	G	L	V	S	D	T	R	L	T	H	A	T	P	A	S	F	A	A	H	Q	P	H	R	S	L	E	N	Q	I	A	S	D	M	L	A	T	G	A	D	V	M	L	S	G	G	L	R	H	W	I	P	K	S
Template Known Secondary structure			B	.	.	S	B		T	T	S		B											T	T											T	T	S					T	T	T			B	S		T	T													T		S							G	G	G	S	S		G	G
Template Predicted Secondary structure				.	.
Template SS confidence
		82	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																																		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.													.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	W	F	D	G	A	N	Y	L	S	E	L	T	E	K	E	I	S	L	W	R	N	G	L	N	S	V	E	D	L	Q	A	N	H	I	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	D	K	G	E	T	Y	K	Q	L	E	K	L	T	Q	G	D	V	Y	L	K	S	K	R	K	D	D	R	N	L	L	T	E	A	E	K	D	G	Y	Q	L	A	F	N	R	N	M	L	D	D	A	K	G	D	K	L	L	G	L	F	A	Y	S	G	M	D	D	G	I	A	Y	S	N	K	K	K	S	G	E
Template Known Secondary structure		G	G	G	T	S										T	T	T		S							S	S											T	T					S	S									S	S							S	S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	F	T	W	A	H	R	I	S	N	R	A	V	D	F	L	Q	Q	P	A	R	A	D	E	P	F	L	M	V	V	S	Y	D	E	P	H	H	P	F	T	C	P	V	E	Y	L	E	K	Y	A	D	F	Y	Y	E	L	G	E	K	A	Q	D	D	L	A	N	K	P	E	H	H	R	L	W	A	Q	A	M	P
Query Conservation
Alig confidence																					.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	Q	P	S	L	K	E	M	T	Q	K	A	L	N	I	L	S	K	.	.	.	D	E	D	G	F	F	L	M	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Known Secondary structure				S															T	T	.	.	.		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.																																															.	270
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		S	P	V	G	D	D	G	L	Y	H	H	P	L	Y	F	A	C	N	D	F	V	D	D	Q	I	G	R	V	I	N	A	L	T	P	E	Q	R	E	N	T	W	V	I	Y	T	S	D	H	.	.	.	G	E	M	M	G	A	H	K	L	I	S
Query Conservation																																																		.	.	.
Alig confidence																																						.	.											.	.	.
Template Conservation																																						.	.
Template Sequence		Q	I	D	W	A	G	H	S	N	D	A	G	T	M	L	H	E	L	L	K	F	D	E	A	I	Q	T	V	Y	E	W	A	K	D	R	E	.	.	D	T	I	V	I	V	T	A	D	H	E	T	G	S	F	G	F	S	Y	S	S	N	D	L
Template Known Secondary structure		S							T	T																								T	T		S	.	.	S												S							B	S	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions