Job Description P31447 Confidence 99.11% Date Thu Jan 5 11:47:37 GMT 2012 Rank 34 Aligned Residues 326 % Identity 13% Template c2w0yB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase Resolution 1.7 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																		.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																		.	.
Query Sequence		N	F	L	F	V	M	T	D	T	Q	A	T	N	M	V	G	C	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	P	L	N	T	Q	N	I	D	S	L	A	A	E	G	I	R	F	N	S	A	Y	.	.	.	T	C	S	P	V	C	T	P	A	R	A	G	L	F	T	G	I	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																		.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																		.	.
Template Conservation
Template Sequence		N	A	I	A	Y	I	V	D	G	M	G	Q	T	Q	I	S	A	A	R	Y	L	N	A	Y	K	T	A	P	E	R	F	P	L	N	V	S	P	A	E	T	P	T	G	F	D	A	F	S	S	R	G	S	M	T	T	F	P	D	D	P	Y	E	T	T	T	D	S	A	A	A	A	T	A	F	A	S	G	V	K	T
Template Known Secondary structure									T	T																			T	T	T	T	T	G	G	G	S	T	T	T	S			T	G	G	G	S	S												S	S		S	S													S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		Y	A	N	Q	S	G	P	W	T	N	N	V	A	P	G	K	N	I	S	T	M	G	R	Y	F	K	D	A	G	Y	H	T	C	Y	I	G	K	W	H	L	D	G	H	D	Y	F	G	T	G	E	C	P	P	E	W	D	A	D	.	.	.	.	.	Y	W	F	D	G	A	N	Y	L	S	E	L	T	E	K	E	I
Query Conservation																																																												.	.	.	.	.
Alig confidence																																																												.	.	.	.	.
Template Conservation
Template Sequence		Y	N	G	A	I	G	G	V	Q	T	S	G	G	G	F	Q	R	V	D	T	V	L	E	R	A	S	A	Q	G	Y	A	T	G	L	I	T	T	T	E	A	T	H	A	T	P	A	A	F	A	A	H	V	E	D	R	G	N	Q	T	E	I	A	R	Q	Y	I	E	E	T	Q	P	D	V	I	L	G	G	Q	R	R
Template Known Secondary structure			T	T		B	S					T	T	T																T											T	T	S										B	S	S	T	T												T	T			S							G	G
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	W	R	N	G	L	N	S	V	E	D	L	Q	A	N	H	I	D	E	T	F	T	W	A	H	R	I	S	N	R	A	V	D	F	L	Q	Q	P	A	R	A	D	E	P	F	L	M	V	V	S	Y	D	E	P	H	H	P	F	T	C	P	V	E	Y	L	E	K	Y	A	D	F	Y	Y	E	L	G	E	K	A
Query Conservation
Alig confidence																													.	.	.	.	.	.											.	.	.
Template Conservation																													.	.	.	.	.	.											.	.	.
Template Sequence		D	F	E	A	D	A	S	N	G	G	T	L	V	D	A	A	R	D	N	G	Y	T	I	A	E	T	A	.	.	.	.	.	.	A	E	L	D	A	V	D	D	P	P	.	.	.	V	L	G	L	F	S	Q	E	S	H	L	D	Y	Y	L	D	R	K	N	D	P	E	N	T	Q	P	N	L	D	A	M	V	D	A
Template Known Secondary structure		G	G	G	S	B		T	T	S	S	B								T	T						S		.	.	.	.	.	.								S	S		.	.	.							S	S	S												T	T
Template Predicted Secondary structure																													.	.	.	.	.	.											.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		Q	D	D	L	A	N	K	P	E	H	.	H	R	L	W	A	Q	A	M	P	S	P	V	G	D	D	G	L	Y	H	H	P	L	Y	F	A	C	N	D	F	V	D	D	Q	I	G	R	V	I	N	A	L	T	P	E	Q	R	E	N	T	W	V	I	Y	T	S	D	H	G	E	M	M	G	A	H	K	L	I	S	K
Query Conservation												.
Alig confidence												.																												.																		.
Template Conservation																																								.																		.
Template Sequence		G	V	D	L	L	S	G	D	P	D	K	G	F	F	L	L	V	E	S	G	R	V	D	H	A	G	H	A	N	Y	P	A	Q	V	A	E	Q	Y	.	E	A	T	Q	V	A	G	Q	L	V	E	Y	A	E	T	T	A	.	E	P	T	F	L	V	S	T	G	D	H	E	C	G	G	L	T	L	G	R	D	S	P
Template Known Secondary structure										S	S																			T		T	T							.																	S	.	S									S	S			S			B	S	S		S	S
Template Predicted Secondary structure																																								.																		.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		298	.	300	.	.	.	.																																																																							.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	A	M	Y	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	V	E	Y	D	V	L	A	A	Q	K	A	T	T	S	R	L	R	D	L	L	A	G	V	R	S	A	D	E	L	E	S	I	V	A	A	H	T	G	I	T	A	L	T	D	R	E	V	A	K	L	R	D	A	P	G	S	I	S	T	I	L	A	E	R	A	G	I	A	F	T	T	D	G	H	T	G	T	D
Template Known Secondary structure		S									T			S										T	T															S	S																G	G	G										T		B				S	S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	I	I	R	S	P	Q	G	E	R	R	Q	V	D	T	P	V	S	H	I	D	L	L	P	T	M	M	A	L	A	D	I	E	K
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		V	P	V	F	A	H	G	P	N	.	.	A	A	R	F	D	A	A	R	D	N	T	A	V	A	D	A	L	A	A	A	L	G	V	S	L
Template Known Secondary structure								S	T	T	.	.	G	G	G	G	S	S				T	T											T
Template Predicted Secondary structure											.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

No model constructed - rank, confidence too low