Job Description P31447 Confidence 100.00% Date Thu Jan 5 11:47:37 GMT 2012 Rank 17 Aligned Residues 294 % Identity 15% Template c2i09A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:phosphopentomutase; PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	R	P	N	F	L	F	V	M	T	D	T	Q	A	.	.	.	.	.	.	T	N	M	V	G	C	Y	S	G	K	P	L	N	T	Q	N	I	D	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	I	R	F	N	S	A	Y	T	C	S	P	V	C	T	P	A
Query Conservation																	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.												.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		F	N	.	.	R	I	H	L	V	V	L	D	S	V	G	I	G	A	A	P	D	A	N	N	F	S	N	A	G	V	P	D	G	A	S	D	T	L	G	H	I	S	K	T	V	G	L	N	V	P	N	M	A	K	I	G	L	G	N	I	P	R	D	T	P	L	K	T	V	P	A	E	N	H	P	T	G	Y	V	T
Template Known Secondary structure			S	.	.								T	T				S	B		T	T	G	G	G	S			T	T			G	G	G											T											T	G	G	G	S			S	S			T	T					S	S		S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		4	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	G	L	F	T	G	I	Y	A	N	Q	S	G	P	W	.	.	.	.	.	.	.	.	.	.	T	N	N	V	A	P	G	K	N	I	S	T	M	G	R	Y	F	K	D	A	G	Y	H	T	C	Y	I	G	K	W	H	L	D	G	H	.	.	.	.	.	.	.	.	.	.	D	Y	F	G	T	G	E	C	P
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	E	E	V	S	L	G	K	D	T	M	T	G	H	W	E	I	M	G	L	N	I	T	E	P	F	D	T	F	W	N	G	F	P	E	E	I	I	S	K	I	E	K	F	S	G	R	K	V	I	R	E	A	N	K	P	Y	S	G	T	G	E	L	I	I	Y	T	S	A	D	P	V	L	Q	I	A	A	H	E
Template Known Secondary structure							S	S			S									T	T				S	S						T	T															S			B		G	G	G		S	B							B						S	S	S								T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																																						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	W	D	A	D	Y	W	F	D	G	A	N	Y	L	S	E	L	T	E	K	E	I	S	L	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	N	S	V	E	D	L	Q	A	N	H	I	D	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	I	P	L	D	E	L	Y	R	I	C	E	Y	A	R	S	I	T	L	E	R	P	A	L	L	G	R	I	I	A	R	P	T	A	N	R	H	D	Y	A	L	S	P	F	A	P	T	V	L	N	K	L	A	D	A	G	V	S	T	Y	A	V	G	K	I	N	D	I	F	N	G	S	G	I	T	N	D	M	G
Template Known Secondary structure		T	T	S																	S	S	T	T	S			S																		S	S										T	T							T	T					T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	T	W	A	H	R	I	S	N	R	A	V	D	F	L	Q	Q	P	A	R	A	D	E	P	F	L	M	V	V	S	Y	D	E	P	H	H	P	F	T	C	P	V	E	Y	L	E	K	Y	A	D	F	Y	Y	E	L	G	E	K	A	Q	D	D	L	A	N	K	P	E	H	H	R	L	W	A	Q	A	M	P	S
Query Conservation
Alig confidence																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	K	S	N	S	H	G	V	D	T	L	I	K	T	M	G	L	S	A	F	.	.	T	K	G	F	S	F	T	N	L	V	D	F	D	A	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S															S	S		.	.		S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	G	D	D	G	L	Y	H	H	P	L	Y	F	A	C	N	D	F	V	D	D	Q	I	G	R	V	I	N	A	L	T	P	E	Q	R	E	N	T	W	V	I	Y	T	S	D	H	G	E	M	M	G	A	H	K	L	I	S	K	G	A	A	M	Y	D	D	I	T	R	I	P	L	I	I	R	S	P	Q	G	E
Query Conservation
Alig confidence		.	.	.	.																													.	.	.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	H	R	R	N	A	H	G	Y	R	D	C	L	H	E	F	D	E	R	L	P	E	I	I	A	A	M	K	.	.	.	.	V	D	D	L	L	L	I	T	A	D	H	G	N	D	P	T	Y	A	G	.	.	.	.	.	.	.	T	D	H	T	R	E	Y	V	P	L	L	A	Y	S	P	S	F	T
Template Known Secondary structure		.	.	.	.	T	T	T	T																						T			.	.	.	.	T	T								S	S	B			T	T	S	S	S	.	.	.	.	.	.	.	S	S		B		B									T	T		S
Template Predicted Secondary structure		.	.	.	.																													.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
						302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Q	V	D	T	P	V	S	H	I	D	L	L	P	T	M	M	A	L	A	D	I	E	K	P	E	I	L	P	G	E	N	I	L	A	V	K
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		G	N	G	V	L	P	V	G	H	Y	A	D	I	S	A	T	I	A	D	N	F	G	V	D	T	A	.	.	M	I	G	E	S	F	L	D	K	L
Template Known Secondary structure											T	T										T	T					.	.	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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