Job Description P69791 Confidence 26.93% Date Thu Jan 5 12:11:57 GMT 2012 Rank 14 Aligned Residues 82 % Identity 16% Template c3bu8B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex Resolution 2.15 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.							.	.	.	.
Query SS confidence																																.	.	.	.	.							.	.	.	.
Query Sequence		L	A	Y	A	A	L	K	Q	A	K	Q	G	D	F	A	A	A	K	A	M	M	D	Q	S	R	M	A	L	N	E	.	.	.	.	.	A	H	L	V	Q	T	.	.	.	.	K	L	I	E	G	D	A	G	E	G	K	M	K	V	S	L	V	L	V	H	A	Q	D	H	L	M	T	S	M	L	A	R	E	L	I
Query Conservation																																.	.	.	.	.							.	.	.	.
Alig confidence																																.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		Y	F	H	E	A	L	R	A	F	R	G	S	R	Y	G	D	F	R	Q	I	R	D	I	M	Q	A	L	L	V	R	P	L	G	K	E	H	T	V	S	R	L	L	R	V	M	Q	C	L	S	R	I	E	E	G	E	N	L	D	C	S	F	D	M	E	A	E	L	T	P	L	E	S	A	I	N	V	L	E	M	I
Template Known Secondary structure												T	T																T	T	S																							T	T	T		T	T				S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
			105	.	.				.	.	110	.	.	.	.	.
Predicted Secondary structure		.				.	.	.
Query SS confidence		.				.	.	.
Query Sequence		.	T	E	L	.	.	.	I	E	L	H	E	K	L	K
Query Conservation		.				.	.	.
Alig confidence		.				.	.	.
Template Conservation
Template Sequence		K	T	E	F	T	L	T	E	A	V	V	E	S	S	R
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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