Job Description P0A756 Confidence 60.65% Date Thu Jan 5 11:04:52 GMT 2012 Rank 77 Aligned Residues 116 % Identity 16% Template c2x2oA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state Resolution 1.13 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		V	L	L	L	Y	A	H	P	E	S	Q	D	S	V	A	N	R	V	L	L	K	P	A	T	Q	L	S	N	V	T	V	H	D	L	Y	A	H	Y	P	D	F	F	I	D	I	P	R	E	Q	A	L	L	R	E	H	E	V	I	V	F	Q	H	P	L	Y	.	T	Y	S	C	P	A	L	L	K	E	W	L	D	R
Query Conservation																																																																			.
Alig confidence																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	V	A	Y	D	S	M	T	G	N	V	K	R	F	I	H	K	L	.	.	.	.	.	.	.	.	N	M	P	A	V	Q	I	D	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	D	E	D	F	I	L	I	T	Y	T	T	G	F	G	N	V	P	E	R	V	L	D	F	L	E	R
Template Known Secondary structure									S	S	S										.	.	.	.	.	.	.	.	T	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									B	T	T	T	B
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.															30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	R	G	F	A	S	G	P	G	G	N	Q	L	A	G	K	Y	W	R	S	V	I	T	T	G	E	P	E	S	A	Y	R	Y	D	A	L	N	R	Y	P	M	S	D	V	L	R	P	F	E	L	A	A	G	M	C	R	M	H	W	L	S	P	I	I	I	Y	W	A	R	R	Q	S	A	Q	E	L	A	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	K	L	K	G	V	S	A	S	G	N	R	N	W	G	.	.	.	.	.	.	.	.	.	.	.	D	M	F	G	A	S	A	D	K	I	S	T	K	Y	E	V	P	I	V	S	K	F	E	L	S	G	T	N	N	.	D	V	E	Y	F	K	E
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G										G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T											T									T	T					.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		59																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.
		167	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	R	A	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	R	E	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions