Return to main results Retrieve Phyre Job Id

Job DescriptionP27297
Confidence21.29%DateThu Jan 5 11:43:43 GMT 2012
Rank16Aligned Residues68
% Identity7%Templatec3oyrB_
PDB info PDB header:transferaseChain: B: PDB Molecule:trans-isoprenyl diphosphate synthase; PDBTitle: crystal structure of polyprenyl synthase from caulobacter crescentus2 cb15 complexed with calcium and isoprenyl diphosphate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130......... 140.........150..
Predicted Secondary structure 














.



Query SS confidence 






















































.












Query Sequence  MPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPW. NTLLERVDIIPTS
Query Conservation   
 
   
  
   
  
  
     

      
  
   
 
           .  

 





 
Alig confidence 






















































.












Template Conservation 



 

          
                    
   
               
   
  
   
Template Sequence  LPLLLAIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPAN
Template Known Secondary structure  S
GGGTTS



TTTTTS
SS
Template Predicted Secondary structure 













Template SS confidence 




































































   249250.........260.........270.........280.........290.........300.........310.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions