Return to main results Retrieve Phyre Job Id

Job DescriptionP22939
Confidence75.31%DateThu Jan 5 11:39:12 GMT 2012
Rank47Aligned Residues135
% Identity13%Templated1n1ba2
SCOP infoTerpenoid synthases Terpenoid synthases Terpenoid cyclase C-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160..... ....170.........180.........190.........200......... 210.........220
Predicted Secondary structure 

..








...
Query SS confidence 



















. .











































. . .










Query Sequence  ASASGIAGMCGGQALDLDAE. . GKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLD. . . KYAESIGLAFQ
Query Conservation    
        

  
    ..    
   
  
   

  
       

 


         
 ...  
  

 


Alig confidence 



















..











































...










Template Conservation   

  
  
    
 



   
 


 



    

 
            
                 
      
 
Template Sequence  YLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILR
Template Known Secondary structure  T



T
TTSTT



TT
Template Predicted Secondary structure 



















Template SS confidence 















































































   414.....420.........430.........440.........450.........460.........470.........480.........490...
 
   221........230.........240.........250.........260.........270...... ...280.........290...
Predicted Secondary structure 











..






Query SS confidence 























































. .
















Query Sequence  VQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ. . LAEQSLDTSALEALADY
Query Conservation 
 

 

        

  
 

  

 
     

  
          
   
  ..
         
  
   
Alig confidence 








.......












......




















..
















Template Conservation 
 


    .......
 
 




 
 
......



   
   

  

 

 
 
    

       

 
Template Sequence  LPDDLGDVP. . . . . . . KTIQCYMKETNAS. . . . . . EEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGMVAGAANI
Template Known Secondary structure 



.......



......T

SS
Template Predicted Secondary structure  .......



......





Template SS confidence 










































































   494.....500.. .......510..... ....520.........530.........540.........550.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions