Return to main results Retrieve Phyre Job Id

Job DescriptionP22939
Confidence5.92%DateThu Jan 5 11:39:12 GMT 2012
Rank90Aligned Residues15
% Identity40%Templatec3t98A_
PDB info PDB header:protein transportChain: A: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup54/nup58
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........
Predicted Secondary structure 



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Query Sequence  CIHAYSLIHDDLPAM
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Template Sequence  LSHLISIIKDDLEDI
Template Known Secondary structure 
Template Predicted Secondary structure 
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   477..480.........490.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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