Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 11 Aligned Residues 284 % Identity 33% Template c3nf2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative polyprenyl synthetase; PDBTitle: crystal structure of polyprenyl synthetase from streptomyces2 coelicolor a3(2) Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		D	F	P	Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	.	.	.	.	.	.	.	.	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	S	T	N	T	L	D	A	P	A	A	A	V
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	T	A	L	L	E	R	G	R	T	L	A	T	P	V	L	R	A	A	V	D	R	L	A	P	P	M	D	T	V	A	A	Y	H	F	G	W	I	D	A	Q	G	N	P	A	D	G	D	G	G	K	A	V	R	P	A	L	A	V	L	S	A	E	V	T	G	A	A	P	E	V	G	V	P	G	A	V	A	V
Template Known Secondary structure																								T	S		T	T									T	T	S	B		T	T	S		B																				T	T	T			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	I	H	A	Y	S	L	I	H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G
Query Conservation
Alig confidence															.	.																																																				.	.	.	.	.	.	.
Template Conservation															.	.																																																				.	.	.	.	.	.	.
Template Sequence		E	L	V	H	N	F	S	L	L	H	D	D	L	.	.	M	D	G	D	E	Q	R	R	H	R	D	T	V	W	K	V	H	G	P	A	Q	A	I	L	V	G	D	A	L	F	A	L	A	N	E	V	L	L	E	L	G	T	V	E	A	G	R	A	T	R	R	.	.	.	.	.	.	.	L	T	K	A	S	R	S
Template Known Secondary structure															.	.			T					T	T																														T	T		S										.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																																				.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	C	G	G	Q	A	L	D	L	D	A	E	G	K	.	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	V	G	D	T
Query Conservation																.
Alig confidence																.																																.
Template Conservation																																																.
Template Sequence		L	I	D	G	Q	A	Q	D	I	S	Y	E	H	R	D	R	V	S	V	E	E	C	L	E	M	E	G	N	K	T	G	A	L	L	A	C	A	S	S	I	G	A	V	L	G	G	.	A	D	E	R	T	A	D	T	L	E	K	Y	G	Y	H	L	G	L	A	F	Q	A	V	D	D	L	L	G	I	W	G	D	P
Template Known Secondary structure													T	T		S															T															T	T	.
Template Predicted Secondary structure																																																.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																																													.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	L	G	K	R	Q	G	A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	Q	A	R	K	K	A	R	D	L	I	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	T	G	K	Q	T	W	S	D	L	R	Q	R	K	K	S	L	P	V	V	A	A	L	A	A	G	G	A	A	S	E	R	L	G	E	I	L	T	A	D	A	K	A	S	D	F	A	N	F	S	E	E	E	F	A	A	R	A	A	L	I	E	E	A	G	G	R	E	W	T	A	D	E	A	R	R	Q	H	T
Template Known Secondary structure					S	S		T	T					T	T														S															T		T	T	G	G	G																T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	R	Q	S	L	K	Q	L	A	E	Q	S	L	D	T	S	A	L	E	A	L	A	D	Y	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	I	E	A	L	D	A	V	D	M	P	D	R	V	R	D	R	F	T	A	L	A	D	F	V	V
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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