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Job DescriptionP22939
Confidence100.00%DateThu Jan 5 11:39:12 GMT 2012
Rank9Aligned Residues277
% Identity35%Templatec3lomA_
PDB info PDB header:transferaseChain: A: PDB Molecule:geranyltranstransferase; PDBTitle: crystal structure of geranyltransferase from legionella2 pneumophila
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  PQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIH
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Template Sequence  KQVIDKYTQRHELYLEQLLNEIIIPAPQIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIH
Template Known Secondary structure  TTS





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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  DDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLD
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Template Sequence  DDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLS
Template Known Secondary structure  STTTT

STT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   164... ..170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  AEGK. HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGAD
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Template Sequence  ELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAPKTTFATLFNKQ
Template Known Secondary structure  TTTSS


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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   243......250.........260.........270.........280.........290........
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Query Sequence  QQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRN
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Template Sequence  QLEEEIAVHYQIAMDS. . . . . . . . . . . . . . . . . . LRLFGSKAAALIELTKQLQNRS
Template Known Secondary structure  T..................TTTTGGGG
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   269270.........280.... .....290.........300......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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