Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 16 Aligned Residues 274 % Identity 34% Template c3llwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase (ispa); PDBTitle: crystal structure of geranyltransferase from helicobacter2 pylori 26695 Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		D	F	P	Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	.	.	.	.	.	.	S	T	N	T	L	D	A	P	A	A	A	V	E	C
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	L	S	F	Y	Y	N	E	C	E	R	F	E	S	F	L	K	N	H	H	L	H	L	E	S	F	H	P	Y	L	E	K	A	F	F	E	M	V	L	N	G	G	K	R	F	R	P	K	L	F	L	A	V	L	C	A	L	V	G	Q	K	D	Y	S	N	Q	Q	T	E	Y	F	K	I	A	L	S	I	E	C
Template Known Secondary structure																				T							S	S		S	S											S																		S								S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	A	Y	S	L	I	H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G	M	C
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	H	T	Y	S	L	I	H	D	D	L	P	C	M	D	N	A	A	L	R	R	N	H	P	T	L	H	A	K	Y	D	E	T	T	A	V	L	I	G	D	A	L	N	T	Y	S	F	E	L	L	S	N	A	L	L	E	.	.	.	S	H	I	I	V	E	L	I	K	I	L	S	A	N	G	G	I	K	G	M	I
Template Known Secondary structure											T	S	T	T	T	T			S			T	T								T																							S		S		.	.	.																S	T	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Q	A	L	D	L	D	A	E	G	K	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	V	G	D	T	A	T	L
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	G	Q	A	L	D	C	Y	F	E	N	T	P	L	N	L	E	Q	L	T	F	L	H	E	H	K	T	A	K	L	I	S	A	S	L	I	M	G	L	V	A	S	G	I	K	D	E	E	L	F	K	W	L	Q	A	F	G	L	K	M	G	L	C	F	Q	V	L	D	D	I	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	S															T																																													.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	Q	G	A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	G	L	E	Q	A	R	K	K	A	R	D	L	I	D	D	A	R	Q	S	L	K	Q	L	A	E	Q	S	L	D	T	S	A	L	E	A	L	A	D	Y	I	I	Q
Query Conservation
Alig confidence		.	.	.	.	.	.																																							.	.	.
Template Conservation		.	.	.	.	.	.																																							.	.	.
Template Sequence		.	.	.	.	.	.	D	V	T	Q	A	K	N	S	F	V	N	L	L	G	L	E	R	A	N	N	Y	A	Q	T	L	K	T	E	V	L	N	D	L	D	A	L	K	P	.	.	.	A	Y	P	L	L	Q	E	N	L	N	A	L	L	N
Template Known Secondary structure		.	.	.	.	.	.							S																											T	T	S	T	T	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.																																							.	.	.
Template SS confidence
								232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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