Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 40 Aligned Residues 238 % Identity 22% Template c3kraB_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranyl diphosphate synthase small subunit; PDBTitle: mint heterotetrameric geranyl pyrophosphate synthase in2 complex with magnesium Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	S	T	N	T	L	D	A	P	A	A	A	V	E	C	I	H	A	Y	S	L	I
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		M	Q	P	Y	W	A	A	I	E	A	D	I	E	R	Y	L	K	K	S	I	T	.	.	I	R	P	P	E	T	V	F	G	P	M	H	H	L	T	F	A	A	P	A	T	A	A	S	T	L	C	L	A	A	C	E	L	V	G	G	D	R	S	Q	A	M	A	A	A	A	A	I	H	L	V	H	A	A	A	Y	V
Template Known Secondary structure																							.	.			S	S														S																T	T			G	G	G	G
Template Predicted Secondary structure																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	.	.	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G	M	C	G	G	Q	A	L
Query Conservation																																																							.	.
Alig confidence							.																																																.	.
Template Conservation							.
Template Sequence		H	E	H	L	P	.	L	T	D	G	S	R	P	V	S	K	P	A	I	Q	H	K	Y	G	P	N	V	E	L	L	T	G	D	G	I	V	P	F	G	F	E	L	L	A	G	S	V	D	P	A	R	T	D	D	P	D	R	I	L	R	V	I	I	E	I	S	R	A	G	G	P	E	G	M	I	S	G	L	H	R
Template Known Secondary structure				T			.		S	S	S	S	S				S	S					S	S																							T			T	T		T	T																T	S	T	T	T
Template Predicted Secondary structure							.
Template SS confidence
		79	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		D	L	D	A	E	G	K	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	.	.	.	.	.	.	.	.	.	A	F	Q	V	Q	D	D	I	L	D	V	V	G	D
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																																								.																			.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		E	E	E	I	V	D	G	N	T	S	L	D	F	I	E	Y	V	C	K	K	K	Y	G	E	M	H	A	C	G	A	A	C	G	A	I	L	G	G	.	A	A	E	E	E	I	Q	K	L	R	N	F	G	L	Y	Q	G	T	L	R	G	M	M	E	M	K	N	S	H	Q	L	I	D	E	N	I	I	G	K	L	K
Template Known Secondary structure			T	T			T	T	S	S													T															T	T	.																										T	T	T	S
Template Predicted Secondary structure																																								.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		232				.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		T	.	.	.	A	T	L	G	K	R	Q	G	A	D	Q	Q
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		E	L	A	L	E	E	L	G	G	F	H	G	K	N	A	E
Template Known Secondary structure									T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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