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Job Description | P22939 | Confidence | 56.26% | Date | Thu Jan 5 11:39:12 GMT 2012 |
Rank | 54 | Aligned Residues | 139 |
% Identity | 9% | Template | c3g4dB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:(+)-delta-cadinene synthase isozyme xc1; |
PDBTitle: crystal structure of (+)-delta-cadinene synthase from gossypium2 arboreum and evolutionary divergence of metal binding motifs for3 catalysis
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Resolution | 2.40 Å |
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146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
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. | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
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Query Sequence |   |
A | S | A | S | G | I | A | G | M | C | G | G | Q | A | L | D | L | D | A | . |
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D | K | Y | A | E | S | I | G | L | A | F | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | A | K | N | A | M | I | R | L | A | Q | S | Y | L | V | E | A | K | W | T | L | Q | N | Y | K | P | S | F | E | E | F | K | A | N | A | L | P | T | C | G | Y | A | M | L | A | I | T | S | F | V | G | . |
M | G | D | I | V | T | P | E | T | F | K | W | A | A | S | D | P | K | I | I | Q | A | S | T | I | I | C | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | |
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221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
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. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | Q | D | D | I | L | D | V | V | G | D | T | A | T | L | G | K | R | Q | G | A | D | Q | Q | L | G | K | S | T | Y | P | A | L | L | G | L | E | Q | A | R | K | K | A | R | D | L | I | D | D | A | R | Q | S | L | K | Q | . |
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L | A | E | Q | S | L | D | T | S | A | L | E | A | L | A | D | Y | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | M | D | D | V | A | E | H | K | F | K | . |
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D | C | S | A | I | E | C | Y | M | E | E | Y | G | V | T | . |
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A | Q | E | A | Y | D | V | F | N | K | H | V | E | S | A | W | K | D | L | N | Q | E | F | L | K | P | T | E | M | P | T | E | V | L | N | R | S | L | N | L | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | |
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460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | |
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. | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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