Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 6 Aligned Residues 281 % Identity 29% Template c3aqbD_ PDB info PDB header:transferase Chain: D: PDB Molecule:component b of hexaprenyl diphosphate synthase; PDBTitle: m. luteus b-p 26 heterodimeric hexaprenyl diphosphate synthase in2 complex with magnesium Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	P	Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	S	T	N	T	L	D	A	P	A	A	A	V	E	C	I	H	A	Y	S
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		L	S	Y	K	A	F	L	N	P	Y	I	I	E	V	E	K	R	L	Y	E	C	I	.	.	.	Q	S	D	S	E	T	I	N	K	A	A	H	H	I	L	S	S	G	G	K	R	V	R	P	M	F	V	L	L	S	G	F	L	N	D	T	Q	K	D	D	L	I	R	T	A	V	S	L	E	L	V	H	M	A	S
Template Known Secondary structure																							T	.	.	.			S	S												T	S															T	T	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G	M	C	G	G	Q	A	L
Query Conservation
Alig confidence								.	.																																																.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	H	D	D	Y	.	.	I	D	N	S	D	M	R	R	G	N	T	S	V	H	I	A	F	D	K	D	T	A	I	R	T	G	H	F	L	L	A	R	A	L	Q	N	I	A	T	I	N	N	S	K	F	H	Q	.	.	.	.	.	.	.	.	.	.	I	F	S	K	T	I	L	E	V	C	F	G	E	F	D
Template Known Secondary structure								.	.			T					T	T								S																					T	T									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		D	L	D	A	E	G	K	.	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	V	G	D	T	A	T	L	G	K	R	Q
Query Conservation									.
Alig confidence									.																																.
Template Conservation																																									.
Template Sequence		Q	M	A	D	R	F	N	Y	P	V	S	F	T	A	Y	L	R	R	I	N	R	K	T	A	I	L	I	E	A	S	C	H	L	G	A	L	S	S	Q	.	L	D	E	Q	S	T	Y	H	I	K	Q	F	G	H	C	I	G	M	S	Y	Q	I	I	D	D	I	L	D	Y	T	S	D	E	A	T	L	G	K	P	V
Template Known Secondary structure						T	T		S															T															T	T	.																															S						T	S		T
Template Predicted Secondary structure																																									.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																																								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	R	K	K	A	R	D	L	I	D	D	A	R	Q	S	L	K	Q	L	A	E	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																.
Template Sequence		G	S	D	I	R	N	G	H	I	T	Y	P	L	M	A	A	I	A	N	L	K	E	Q	D	D	D	K	L	E	A	V	V	K	H	L	T	S	T	S	D	D	E	V	Y	Q	Y	I	V	S	Q	V	K	Q	Y	G	I	E	P	A	E	L	L	S	R	K	Y	G	D	K	A	K	Y	H	L	S	Q	L	Q	.	D
Template Known Secondary structure		T					T	T																T	T										T			T	T																	T																					T	S		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	T	S	A	L	E	A	L	A	D	Y	I	I	Q	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	I	K	D	Y	L	E	E	I	H	E	K	M	L	K	R	V
Template Known Secondary structure		S														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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