Job Description P22939 Confidence 95.72% Date Thu Jan 5 11:39:12 GMT 2012 Rank 46 Aligned Residues 124 % Identity 14% Template c2zcpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dehydrosqualene synthase; PDBTitle: crystal structure of the c(30) carotenoid dehydrosqualene2 synthase from staphylococcus aureus complexed with3 farnesyl thiopyrophosphate Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	A	G	M	C	G	G	Q	A	L	D	L	D	A	E	G	K	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V
Query Conservation
Alig confidence																	.																												.	.	.	.										.	.	.
Template Conservation																	.																												.	.	.	.										.	.	.
Template Sequence		Q	S	F	Y	N	L	I	D	T	V	Y	K	D	Q	H	.	F	T	M	F	E	T	D	A	E	L	F	G	Y	C	Y	G	V	A	G	T	V	G	E	V	L	T	P	.	.	.	.	I	L	S	D	H	E	T	H	Q	.	.	.	T	Y	D	V	A	R	R	L	G	E	S	L	Q	L	I	N	I	L	R	D	V
Template Known Secondary structure													G	G	G	S	.					S	S												T										.	.	.	.				S			S			.	.	.
Template Predicted Secondary structure																	.																												.	.	.	.										.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		229	230	.	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	D	T	A	T	L	G	K	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	G	L	E	Q	A	R	K	K	A	R	D	L	I	D	D	A	R	Q	S	L	K	Q	L	A	E	Q	S
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		G	E	D	F	E	N	.	E	R	I	Y	F	S	K	Q	R	L	K	Q	Y	E	V	D	I	A	E	V	Y	Q	N	G	V	N	N	H	Y	I	D	L	W	E	Y	Y	A	A	I	A	E	K	D	F	R	D	V	M	D	Q	I	K	V	F	S	I	E	A
Template Known Secondary structure							T	.	T				S								T	T																																				S	G	G	G	S		T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		174	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions