Job Description P22939 Confidence 5.52% Date Thu Jan 5 11:39:12 GMT 2012 Rank 96 Aligned Residues 54 % Identity 20% Template c2r17C_ PDB info PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 35; PDBTitle: functional architecture of the retromer cargo-recognition complex Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.				.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.					.	.	.
Query SS confidence																																									.					.	.	.
Query Sequence		Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	.	K	R	L	R	.	.	.	P	F	L	V	Y	A	T	G	H	M	F
Query Conservation																																									.					.	.	.
Alig confidence																																									.					.	.	.
Template Conservation
Template Sequence		D	F	A	D	E	Q	S	L	V	G	R	F	I	H	L	L	R	S	E	D	P	D	Q	Q	Y	L	I	L	N	T	A	R	K	H	F	G	A	G	G	N	Q	R	I	R	F	T	L	P	P	L	V	F	A	A	Y	Q	L	A
Template Known Secondary structure			T	T	T	T												T	T	S																		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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