Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 12 Aligned Residues 273 % Identity 43% Template c2h8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranyltranstransferase; PDBTitle: the 1.6a crystal structure of the geranyltransferase from2 agrobacterium tumefaciens Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		D	F	P	Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	.	.	.	.	.	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	S	T	N	T	L	D	A	P	A	A	A	V	E	C	I
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		N	F	E	T	R	L	R	E	N	A	A	K	T	E	A	L	L	G	H	L	L	S	G	E	A	R	A	D	E	I	T	R	P	Q	N	L	L	E	A	M	R	H	G	V	L	N	G	G	K	R	L	R	P	F	L	V	I	E	S	V	A	L	L	G	G	D	A	E	A	G	L	H	V	G	A	A	L	E	C	L
Template Known Secondary structure																						T		S	S			T	T																		T	S		S														T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	Y	S	L	I	H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G	M	C	G
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		H	C	Y	S	L	V	H	D	D	L	P	A	M	D	D	D	D	L	R	R	G	Q	P	T	V	H	R	K	F	D	E	A	T	A	I	L	A	G	D	S	L	L	T	L	A	F	D	I	I	A	S	D	.	D	N	P	L	A	A	E	R	K	A	A	L	V	I	S	L	A	R	A	A	G	I	G	G	M	A	G
Template Known Secondary structure										T	S	T	T	T	T			S			T	T								S																						S	T	.	T	S		S																	S	T	T	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	L	D	L	D	A	E	G	K	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	V	G	D	T	A	T	L	G
Query Conservation
Alig confidence																																												.																														.	.	.	.	.	.	.	.
Template Conservation																																												.																														.	.	.	.	.	.	.	.
Template Sequence		G	Q	A	L	D	L	A	A	E	K	K	A	P	D	E	D	G	I	I	T	L	Q	A	M	K	T	G	A	L	L	R	F	A	C	E	A	G	A	I	I	A	G	.	S	N	Q	A	E	R	Q	R	L	R	L	F	G	E	K	I	G	L	S	F	Q	L	A	D	D	L	L	D	L	.	.	.	.	.	.	.	.
Template Known Secondary structure												S															T																T	.																														.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																														.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	G	A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	G	L	E	Q	A	R	K	K	A	R	D	L	I	D	D	A	R	Q	S	L	K	Q	L	A	E	Q	S	L	D	T	S	A	L	E	A	L	A	D	Y	I	I	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	T	K	G	T	L	V	A	L	R	G	E	A	W	A	R	E	K	L	Q	E	Q	V	A	E	A	S	E	L	L	A	P	Y	G	E	.	.	.	K	A	A	I	L	I	A	A	A	R	F	I	A	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																													T	G	G	G	G	G	.	.	.	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
											268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions