Job Description P22939 Confidence 100.00% Date Thu Jan 5 11:39:12 GMT 2012 Rank 35 Aligned Residues 262 % Identity 21% Template c2azjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranylgeranyl pyrophosphate synthetase; PDBTitle: crystal structure for the mutant d81c of sulfolobus2 solfataricus hexaprenyl pyrophosphate synthase Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	E	A	C	V	K	Q	A	N	Q	A	L	S	R	F	I	A	P	L	P	F	Q	N	T	P	V	V	E	T	M	Q	Y	G	A	L	L	G	G	K	R	L	R	P	F	L	V	Y	A	T	G	H	M	F	G	V	S	T	N	T	L	D	A	P	A	A	A	V	E	C	I	H	A	Y	S	L	I	H	D
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		E	F	W	L	E	A	K	A	T	I	D	R	L	I	E	Q	F	L	N	S	N	R	D	W	D	L	.	.	.	V	D	I	S	S	Y	I	L	K	D	G	K	R	F	R	G	T	L	N	M	F	F	T	V	A	L	G	G	D	I	K	D	S	Y	G	G	A	L	A	I	E	I	L	H	S	A	S	L	A	L	C
Template Known Secondary structure		T	T																		T	T	G	G	G	G	G	.	.	.	G	T						T	S																T	T	T			S	G	G	G
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	A	M	D	D	D	D	L	R	R	G	L	P	T	C	H	V	K	F	G	E	A	N	A	I	L	A	G	D	A	L	Q	T	L	A	F	S	I	L	S	D	A	D	M	P	E	V	S	D	R	D	R	I	S	M	I	S	E	L	A	S	A	S	G	I	A	G	M	C	G	G	Q	A	L	D	L	D	A
Query Conservation
Alig confidence				.	.																																																.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation				.	.																																																.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		D	I	.	.	V	D	L	D	A	T	R	R	G	D	K	A	A	W	V	V	Y	G	N	R	K	V	I	F	I	T	N	Y	L	I	P	T	A	L	R	I	I	Q	T	S	Y	G	D	D	A	L	N	.	.	.	.	.	.	.	.	.	.	T	S	I	E	L	W	K	D	T	S	V	G	A	L	R	D	M	.	.
Template Known Secondary structure				.	.					S		S		S																																							.	.	.	.	.	.	.	.	.	.																		.	.
Template Predicted Secondary structure				.	.																																																.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		82	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		E	G	K	H	V	P	L	D	A	L	E	R	I	H	R	H	K	T	G	A	L	I	R	A	A	V	R	L	G	A	L	S	A	G	D	K	G	R	R	A	L	P	V	L	D	K	Y	A	E	S	I	G	L	A	F	Q	V	Q	D	D	I	L	D	V	V	.	.	.	.	G	D	T	A	T	L	G	K	R	Q	G
Query Conservation																																																																			.	.	.	.
Alig confidence		.	.	.	.																															.	.																														.	.	.	.
Template Conservation		.	.	.	.																															.	.
Template Sequence		.	.	.	.	Y	D	N	S	D	Y	I	R	T	I	E	L	K	T	G	S	L	F	K	L	S	T	V	L	S	A	Y	A	S	K	.	.	H	Y	N	T	K	Q	Q	M	L	D	V	G	K	Y	L	G	I	I	Y	Q	V	I	D	D	F	V	D	Y	K	T	K	K	V	E	E	I	D	G	S	A	K	Q	L	F
Template Known Secondary structure		.	.	.	.	S	S												T															T	T	.	.		G	G	G																							T	T	T	S	S		S	S				S					T
Template Predicted Secondary structure		.	.	.	.																															.	.
Template SS confidence
						148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Q	Q	L	G	K	S	T	Y	P	A	L	L	G	L	E	Q	A	R	K	K	A	R	D	L	I	D	D	A	R	Q	S	L	K	Q	L	A	E	Q	S	L	D	T	S	A	L	E	A	L	A	D	Y	I	I	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		K	Y	Y	R	E	G	K	L	E	E	Y	V	R	S	V	Y	L	E	Y	K	Q	K	Y	D	.	.	.	.	.	.	.	E	L	I	S	N	I	P	F	Q	S	K	Y	L	S	E	I	R	S	L	P	E	F	L	A	N
Template Known Secondary structure					T	T	S																			.	.	.	.	.	.	.						S				S	T	T	S	S	G	G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions