 |
Job Description | P37003 | Confidence | 5.15% | Date | Thu Jan 5 11:54:14 GMT 2012 |
Rank | 76 | Aligned Residues | 40 |
% Identity | 15% | Template | d2arca_ |
SCOP info | Double-stranded beta-helix
| Regulatory protein AraC
| Regulatory protein AraC
|
Resolution | 1.50 |
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | D | P | V | S | W | T | Q | R | P | E | F | A | G | V | R | A | L | P | I | A | D | D | V | A | G | V | I | F | A | L | N | G | G | D | L | G | E | D | T | G | C | V | Y | Y | F | A | P | D | T |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |   |
Template Sequence |   |
P | L | G | M | K | G | Y | I | L | N | L | T | I | R | G | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | V | K | N | Q | G | R | E | F | V | C | R | P | G | D | I | L | L | F | P | P | G | E |
Template Known Secondary structure |   |
T | T |
|
| S | S |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|