Return to main results Retrieve Phyre Job Id

Job DescriptionP39285
Confidence68.61%DateThu Jan 5 11:58:57 GMT 2012
Rank67Aligned Residues67
% Identity15%Templated1vqot1
SCOP infoSH3-like barrel Translation proteins SH3-like domain Ribosomal proteins L24p and L21e
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   933......940.. . ......950.........960.........970.........980.........990.........1000.......
Predicted Secondary structure 





..
...




















Query SS confidence 









. .
. . .































































Query Sequence  PIRIGDTVTI. . R. . . DLTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVT
Query Conservation 
   

 
  .. ...   
 
  
  
 
 
   
     


         
 
      
      
 
  
     
Alig confidence 









..
...








........























..




















Template Conservation   
 


 
 

 
  


 


  
........      
 




  
   
  
 ..


 


 
      
  
  
Template Sequence  RVNAGDTVEVLRGDFAGEEGEVINV. . . . . . . . DLDKAVIHVEDVTLEKTDGEEVPR. . PLDTSNVRVTDLDLEDEKREA
Template Known Secondary structure 

TT

SSTTTT
........TTTTTT

TTS

..
B
GGG



S
Template Predicted Secondary structure 









........








..











Template SS confidence 















































































   41........50.........60..... ....70.........80......... 90.........100.........110
 
   1008.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  EI
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  RL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   111.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions