 |
Job Description | P39285 | Confidence | 42.98% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 144 | Aligned Residues | 23 |
% Identity | 30% | Template | d1ny4a_ |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | UNK |
|
  |   |
933 | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | R | I | G | D | T | V | T | I | R | D | L | T | G | S | V | T | K | I | N | T | R |
Query Conservation |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |
Template Sequence |   |
P | V | R | V | G | D | I | L | I | L | R | E | T | E | R | E | A | R | E | I | K | S | R |
Template Known Secondary structure |   |
|
|
| T | T |
|  |  |  |
| S |
|
|
|
|
|
|
|
|
| S |
|
|
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|