Job Description P39285 Confidence 23.07% Date Thu Jan 5 11:58:57 GMT 2012 Rank 335 Aligned Residues 111 % Identity 11% Template d1iuha_ SCOP info LigT-like LigT-like 2'-5' RNA ligase LigT Resolution 2.50

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		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.			.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		N	W	S	L	S	D	S	V	T	R	V	V	L	T	I	P	A	P	A	D	A	N	S	E	E	V	T	E	I	L	L	T	A	A	R	R	C	S	L	V	I	D	N	P	A	P	E	V	F	L	V	D	L	Q	.	.	Q	G	I	Q	I	F	E	L	R	I	Y	A	A	E	M	G	H	R	M	P	L	R	H	E
Query Conservation																																																								.	.
Alig confidence																																						.	.	.	.	.	.													.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		K	P	V	P	P	H	Q	L	H	L	T	L	L	F	L	G	E	R	P	E	E	E	L	P	D	Y	L	A	L	G	H	R	L	A	R	L	.	.	.	.	.	.	E	A	P	F	R	A	R	L	R	G	T	G	Y	F	P	N	E	G	T	P	R	V	W	F	A	K	A	E	A	E	G	F	L	R	L	A	E	G
Template Known Secondary structure						G	G	G													G	G	G															.	.	.	.	.	.	S														S	S	S	S	S		S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		1059	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.							.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		I	H	Q	L	I	L	A	G	F	H	A	H	G	I	D	M	P	.	.	.	.	.	.	F	P	P	F	Q	M	R	L	E	S	L	N	G	K	Q	T	G	R	T	L	T	S
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	G	V	E	E	L	L	G	E	E	A	V	R	I	P	G	W	D	K	P	F	K	P	H	I	T	L	A	R	R	K	A	P	A	P	R	V	P	P	V	L	F	G
Template Known Secondary structure											G	G	G	G	G	G	S	T	T	T	T	S												S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions