 |
Job Description | P39285 | Confidence | 39.20% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 171 | Aligned Residues | 34 |
% Identity | 24% | Template | d1e32a3 |
SCOP info | Cdc48 domain 2-like
| Cdc48 domain 2-like
| Cdc48 domain 2-like
|
Resolution | 2.9 |
|
  |   |
917 | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | F | A | N | F | I | S | G | L | I | I | L | F | E | K | P | I | R | I | G | D | T | V | T | I | R | D | L | T | G | S | V | T |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |
|
|
Template Sequence |   |
N | L | F | E | V | Y | L | K | P | Y | F | L | E | A | Y | R | P | I | R | K | G | D | I | F | L | V | R | G | G | M | R | A | V | E |
Template Known Secondary structure |   |
|  |  |  |  | T |  |  |  |  |  | T | T | S |
|  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|