 |
Job Description | P39285 | Confidence | 27.76% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 260 | Aligned Residues | 41 |
% Identity | 20% | Template | d1e1oa1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Anticodon-binding domain
|
Resolution | 2.12 |
|
  |   |
927 | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | L | F | E | K | P | I | R | I | G | D | T | V | T | I | R | D | L | T | G | S | V | T | K | . |
. |
. |
. |
. |
I | N | T | R | A | T | T | I | S | D | W | D | R | K | E | I | I | V | P |
Query Conservation |   |
  |
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|   |   | . | . | . | . | . |
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |
| . | . | . |   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
Y | N | D | Q | F | K | K | W | D | L | G | D | I | I | . |
. |
. |
G | A | R | G | T | L | F | K | T | Q | T | G | E | L | S | I | H | C | T | E | L | R | L | L | T | K | A | L | R | P | L | P |
Template Known Secondary structure |   |
 |  |  | T | G | G | G |
|
| T | T |
|  |  | . | . | . |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|