 |
Job Description | P39285 | Confidence | 23.08% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 333 | Aligned Residues | 37 |
% Identity | 19% | Template | c4a2iV_ |
PDB info |
PDB header:ribosome/hydrolase | Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; |
PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
|
Resolution | 16.50 Å |
|
  |   |
932 | . | . | . | . | . | . | . | 940 | . | . | |
|
. | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | I | R | I | G | D | T | V | T | I | . |
. |
R | D | L | T | G | S | V | T | K | I | N | T | R | A | T | T | I | S | D | W | D | R | K | E | I | I | V | P | N |
Query Conservation |   |
  |
|   |   |   |
|
|   |
|   |   | . | . |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |
| . | . | . |   |   |   |   |   |
|
|
|
Template Sequence |   |
R | S | L | V | T | G | D | R | V | V | W | R | P | G | K | V | K | G | I | V | E | A | V | H | E | T | S | V | L | T | R | . |
. |
. |
P | V | K | P | I | A | A | N |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |  |
| B |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|