Job Description P39285 Confidence 33.35% Date Thu Jan 5 11:58:57 GMT 2012 Rank 210 Aligned Residues 42 % Identity 17% Template c3p8bB_ PDB info PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 Resolution 1.80 Å

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		933	.	.	.	.	.	.	940	.	.	.						.	.	.	.	.	.	950	.	.						.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.
Predicted Secondary structure													.	.	.	.	.										.	.	.	.	.
Query SS confidence													.	.	.	.	.										.	.	.	.	.
Query Sequence		P	I	R	I	G	D	T	V	T	I	R	.	.	.	.	.	D	L	T	G	S	V	T	K	I	.	.	.	.	.	N	T	R	A	T	T	I	S	D	W	D	R	K	E	I	I	V	P	N	K	A	F
Query Conservation													.	.	.	.	.										.	.	.	.	.
Alig confidence													.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		G	L	E	P	G	D	L	V	E	V	I	A	G	P	F	K	G	Q	K	A	K	V	V	K	I	D	E	S	K	D	E	V	V	V	Q	F	I	D	A	I	V	P	I	P	V	T	I	K	G	D	Y	V
Template Known Secondary structure		T			T	T							S	S	T	T	T	T										T	T	T	T							S	S		S	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions