Job Description P39285 Confidence 21.12% Date Thu Jan 5 11:58:57 GMT 2012 Rank 412 Aligned Residues 163 % Identity 12% Template c3h0mE_ PDB info PDB header:ligase Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus Resolution 2.80 Å

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		930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	K	P	I	R	I	G	D	T	V	T	I	R	D	L	T	G	S	V	T	K	I	N	T	R	A	T	T	I	S	D	W	D	R	K	E	I	I	V	P	N	K	A	F	I	T	E	Q	F	I	N	W	S	L	S	D	S	V	T	R	V	V	L	T	I	P	A	P	A	D	A	N	S	E	E	V	T	E	I
Query Conservation
Alig confidence																																												.	.	.	.	.														.				.
Template Conservation																																												.	.	.	.	.														.				.
Template Sequence		Y	E	K	P	L	A	T	N	G	W	V	E	L	N	L	P	N	G	E	K	K	K	V	R	I	R	R	L	H	I	E	E	D	A	G	K	N	I	H	E	G	D	.	.	.	.	.	K	T	L	V	D	L	N	R	A	G	T	P	L	.	M	E	I	.	V	T	E	P	D	I	R	T	P	E	E	A	R	L	F
Template Known Secondary structure		S	S	S		S											T	T	S																							T	T	.	.	.	.	.							S	S	T	T				.				.				T	T	B		S
Template Predicted Secondary structure																																												.	.	.	.	.														.				.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		1010	.	.	.									.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		L	L	T	A	.	.	.	.	.	.	.	.	A	R	R	C	S	L	V	I	D	N	P	A	P	E	V	F	L	V	D	L	Q	Q	G	I	Q	I	F	E	L	R	I	Y	A	A	E	M	G	H	R	M	P	L	R	H	E	I	H	Q	L	I	L	A	G	F	H	A	H	G	I	D	M	P	F	P	P	F	Q	M
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	L	R	N	I	M	R	Y	A	G	V	S	K	A	D	M	E	K	G	Q	L	R	C	D	I	N	V	S	I	R	P	K	G	S	K	E	F	G	T	R	V	E	I	K	N	V	N	S	F	R	F	V	Q	K	A	L	E	Y	E	I	E	R	Q	I	N	V	V	E	E	G	G	E	V	V	Q	E	T	R
Template Known Secondary structure													T	S					G	G	G	T	S												T	T			S												S																					T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		1082	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	S	L	N	G	K	Q	T	G	R	T	L	T	S	A	G	K	G
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		T	F	D	P	.	.	Q	T	G	K	T	Y	P	M	R	T	K	E	E	A
Template Known Secondary structure					T	.	.	T	T	T						S
Template Predicted Secondary structure						.	.
Template SS confidence
		250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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