Job Description P39285 Confidence 96.14% Date Thu Jan 5 11:58:57 GMT 2012 Rank 21 Aligned Residues 129 % Identity 9% Template c3ghgK_ PDB info PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen Resolution 2.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	S	W	G	A	Y	A	A	T	A	P	D	S	K	Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		L	H	A	D	P	D	L	G	V	L	C	P	T	G	C	Q	L	Q	E	A	L	L	Q	Q	E	R	P	I	R	N	S	V	D	E	L	N	N	N	V	E	A	V	S	.	.	Q	T	S	S	S	S	F	Q	Y	M	Y	L	L	K	D	L	W	Q	K	R	Q	K	Q	V	K	D	N	E	N	V	V	N	E	Y	S
Template Known Secondary structure				S	S	T	T	S																	T	T	G	G	G	T											T	T	S	S	.	.							T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	R	S	V	S	P	G	M	S	T	D	A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		S	E	L	E	K	H	Q	L	Y	I	D	.	.	.	.	E	T	V	N	S	N	I	P	T	N	L	R	V	L	R	S	I	L	E	N	L	R	S	K	I	Q	K	L	E	S	D	V	S	A	Q	M	E	Y	C	R
Template Known Secondary structure													.	.	.	.						T																																	T	T
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions