Job Description P39285 Confidence 83.28% Date Thu Jan 5 11:58:57 GMT 2012 Rank 51 Aligned Residues 210 % Identity 7% Template c3g67A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima Resolution 2.17 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	T	A	P	D	S	K	Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		I	E	E	V	K	E	R	F	V	N	L	N	R	L	F	Q	E	L	V	G	D	F	Q	A	K	S	D	Q	L	V	S	V	I	Q	D	M	E	.	.	K	I	S	E	N	I	M	E	E	L	K	K	S	G	T	N	V	D	Q	I	V	E	R	V	K	E	A	S	S	Q	I	G	E	T	L	E	N	I	R	S	I
Template Known Secondary structure																																							.	.
Template Predicted Secondary structure																																							.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	G	M	S	T	D	A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q	N	F	A	L	Q
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		E	K	L	I	Q	.	.	N	I	M	R	I	A	R	E	T	N	I	L	A	L	N	A	T	I	E	A	A	R	A	G	E	A	G	K	G	F	M	I	V	A	N	E	V	Q	N	L	S	N	E	T	N	E	V	T	K	Q	I	V	E	K	A	R	E	I	L	E	S	S	Q	R	S	L	E	N	L	E	F	M	A
Template Known Secondary structure							.	.																									G	G	G
Template Predicted Secondary structure							.	.
Template SS confidence
		120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	A	R	L	K	A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A	L	R	N	Q	L	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	F	E	T	V	G	K	T	L	Q	N	M	V	R	F	M	E	N	N	V	K	L	L	Q	E	V	R	N	S	L	D	T	S	K	E	S	L	S	E	K	S	A	E	I	D	S	A	T	K	V	L	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions