Job Description P39285 Confidence 30.74% Date Thu Jan 5 11:58:57 GMT 2012 Rank 234 Aligned Residues 188 % Identity 11% Template c3fb2B_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin alpha chain, brain spectrin; PDBTitle: crystal structure of the human brain alpha spectrin repeats2 15 and 16. northeast structural genomics consortium target3 hr5563a. Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	.	.	.	.	.	.	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V	S	P	G	M	S	T	D
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		D	L	Q	R	F	L	S	D	F	R	D	L	X	S	W	I	N	G	I	R	G	L	V	S	S	D	E	L	A	K	D	V	T	G	A	E	A	L	L	E	R	H	Q	E	H	R	T	E	I	D	A	R	A	G	T	F	Q	A	F	E	Q	F	G	Q	Q	L	L	A	H	G	H	Y	.	.	.	.	.	A	S	P
Template Known Secondary structure																									T						S	S																					T																	T	T		T	.	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.						.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q	N	F	A	L	Q	S	D	S	A	R	L	K
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		E	I	K	Q	K	L	D	I	L	D	Q	E	R	A	D	L	E	K	A	W	V	Q	.	R	R	X	X	L	D	Q	C	L	E	L	Q	L	F	H	R	D	C	E	Q	A	E	N	W	X	A	A	R	E	A	F	L	D	S	V	E	A	L	I	K	K	H	E	D	F	D	K	A	I	N	V	Q	E	E	K	I	A
Template Known Secondary structure																								.																														T	T
Template Predicted Secondary structure																								.
Template SS confidence
		1415	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.		.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	Q	A	F	A	D	Q	L	I	A	A	G	H	Y	A	K	G	D	I	S	S	R	R	N	E	V	L	D	R	W	R	R	L	K	A	Q	X	I	E
Template Known Secondary structure													T	T		T	T																								T
Template Predicted Secondary structure
Template SS confidence
		1503	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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