Return to main results Retrieve Phyre Job Id

Job DescriptionP39285
Confidence23.03%DateThu Jan 5 11:58:57 GMT 2012
Rank336Aligned Residues76
% Identity16%Templatec3eoeC_
PDB info PDB header:transferaseChain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   934.....940.. .......950... ......960. ........970....... ..980.........990.......
Predicted Secondary structure 




..

...
...







........





Query SS confidence 








. .










. . .







. . .















. . . . . . . .



















Query Sequence  IRIGDTVTI. . RDLTGSVTKIN. . . TRATTISD. . . WDRKEIIVPNKAFITE. . . . . . . . QFINWSLSDSVTRVVLTIPA
Query Conservation     

 
  ..    
 
  
 ... 
 
 
  ... 
     


      ........   
 
      
      
Alig confidence 








..










...







...















........

















.
Template Conservation 
  

 
 



 
 
 
  
    
   
   
 
   





     

 




  


 

    

 

 

.
Template Sequence  VKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASF. V
Template Known Secondary structure 

TT
TTTT
SSSS

SS
B
TT



S
SS
TTTTTT

TT.
Template Predicted Secondary structure 



































.
Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220......... 230
 
   998.1000.........1010
Predicted Secondary structure 




Query SS confidence 












Query Sequence  PADANSEEVTEIL
Query Conservation   
  
       
Alig confidence 












Template Conservation 
   

   
  
Template Sequence  QSADDVRYIRGLL
Template Known Secondary structure 
S
Template Predicted Secondary structure 

Template SS confidence 












   231........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions