Job Description P39285 Confidence 21.74% Date Thu Jan 5 11:58:57 GMT 2012 Rank 383 Aligned Residues 62 % Identity 16% Template c3cveC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:homer protein homolog 1; PDBTitle: crystal structure of the carboxy terminus of homer1 Resolution 1.75 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	D	I	V	A	Q	F	K	I	N	R	E	L	S	A	A	L	N	Q	Q	A	Q	R	M	D	L	V	A	S	Q	Q	R	Q	A	A	S	Q	T	L	Q	V	R	Q	A	L	N	T	L	R	E	Q	S	Q	W	L	G	S	S	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	X	K	L	Q	E	V	E	I	R	N	K	D	L	E	G	Q	L	S	E	X	E	Q	R	L	E	K	S	Q	S	E	Q	D	A	F	R	S	N	L	K	T	L	L	E	I	L	D	G	K	I	F	E	L	T	E	L	R	D	N	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions