Return to main results Retrieve Phyre Job Id

Job DescriptionP39285
Confidence27.09%DateThu Jan 5 11:58:57 GMT 2012
Rank265Aligned Residues37
% Identity24%Templatec2xhcA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of thermotoga maritima n-utilization substance g2 (nusg)
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   933......940... ......950.. .......960.........
Predicted Secondary structure 






.....
...




Query SS confidence 










. . . . .








. . .
















Query Sequence  PIRIGDTVTIR. . . . . DLTGSVTKI. . . NTRATTISDWDRKEIIV
Query Conservation 
   

 
   .....   
 
  
...  
 
 
   
     
Alig confidence 










.....








...
















Template Conservation   




















 


 

















Template Sequence  GFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPV
Template Known Secondary structure 


TT

SSTTTT
TTTTTT
Template Predicted Secondary structure 


















Template SS confidence 












































   298.300.........310.........320.........330.........340..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions