Job Description P39285 Confidence 41.79% Date Thu Jan 5 11:58:57 GMT 2012 Rank 153 Aligned Residues 167 % Identity 10% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		A	E	N	S	A	D	L	P	K	D	I	V	A	Q	F	K	I	N	R	E	L	S	A	A	L	N	Q	Q	A	Q	R	M	D	L	V	A	S	Q	Q	R	Q	A	A	S	Q	T	L	Q	V	R	Q	A	L	N	T	L	R	E	Q	S	Q	W	L	G	S	.	.	S	N	L	L	G	E	A	L	R	A	Q	V	A
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		V	K	N	M	K	I	E	D	E	D	F	L	K	L	M	K	K	I	D	V	L	N	T	K	L	S	S	N	P	L	T	N	S	M	R	L	E	E	L	Y	G	K	Y	S	R	K	H	D	L	H	E	D	M	K	Q	L	K	R	K	I	S	E	S	Q	A	V	I	Q	L	D	D	L	R	R	R	K	R	V	L	R
Template Known Secondary structure		T	T	T	S																						T	T	S					S	S	S												.																T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	E	M	P	K	P	Q	Q	L	D	T	E	M	A	Q	L	R	V	Q	R	L	R	Y	E	D	L	L	N	K	Q	P	L	L	R	Q	I	H	Q	A	D	G	Q	P	L	T	A	E	Q	N	R	I	L	E	A	Q	L	R	T	Q	R	E	L	L	N	S	L	L	Q	G	G	D	T	L	L	L	E	L	T
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		R	L	G	F	C	T	P	N	D	I	I	E	L	K	G	R	V	A	C	E	I	S	S	G	D	E	L	L	L	T	E	L	I	F	N	G	N	F	N	E	L	K	P	E	Q	A	A	A	L	L	S	C	F	A	F	Q	.	.	.	E	R	C	K	E	A	P	R	L	K	P	E	L	A	E	P	L	K	A	M	R
Template Known Secondary structure				T	S	B		T	T			B									T			S	S												T	T	T	T	T																	.	.	.				S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		891	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.				.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	K	V	S	N	G	Q	L	E	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	A	A	K	I	A	K	I	M	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		968	.	970	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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