Job Description P39285 Confidence 22.94% Date Thu Jan 5 11:58:57 GMT 2012 Rank 339 Aligned Residues 100 % Identity 24% Template c2vldA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:upf0286 protein pyrab01260; PDBTitle: crystal structure of a repair endonuclease from pyrococcus2 abyssi Resolution 2.60 Å

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		929	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.						.	.	.	.	.	980	.	.	.																	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	E	K	P	I	R	I	G	D	T	V	T	I	R	D	L	T	G	S	V	T	K	I	N	T	R	A	T	T	I	S	D	W	D	R	K	E	I	I	V	P	N	K	A	F	.	.	.	.	.	I	T	E	Q	F	I	N	W	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	S
Query Conservation																																																.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																													.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		L	L	D	L	A	E	K	H	G	G	V	V	T	I	F	A	R	.	C	K	V	H	Y	E	G	R	A	K	S	E	L	G	E	G	D	R	I	I	I	I	K	P	D	G	S	F	L	I	H	Q	N	K	K	R	E	P	V	N	W	Q	P	P	G	S	K	V	T	F	K	E	N	S	X	I	S	I	R	R	R	P
Template Known Secondary structure										T									.							S	S	S															T	T	S							S	S		S	S		S					T	T						S	S								S	S	S
Template Predicted Secondary structure																			.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		988	.	990	.	.	.	.	.	.	.	.	.							1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		V	T	R	V	V	L	T	I	P	A	P	A	.	.	.	.	.	.	D	A	N	S	E	E	V	T	E	I	L	L	T	A	A	R	R	C	S	L	V	I	D	N	P	A	P	E	V	F
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	R	L	E	V	E	I	I	E	P	Y	S	L	V	V	F	L	A	E	D	Y	E	E	S	E	A	E	X	A	N	L	I	F	E	N	P	R	V	I	E	E	G	F	K	P	I	Y
Template Known Secondary structure																																						G	G	G	T		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions