Job Description P39285 Confidence 95.56% Date Thu Jan 5 11:58:57 GMT 2012 Rank 24 Aligned Residues 152 % Identity 9% Template c2v71A_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel Resolution 2.24 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	T	A	P	D	S	K	Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V
Query Conservation
Alig confidence																																											.	.
Template Conservation																																											.	.
Template Sequence		F	S	S	L	K	E	E	T	A	Y	W	K	E	L	S	X	K	Y	K	Q	S	F	Q	E	A	R	D	E	L	V	E	F	Q	E	G	S	R	E	L	E	A	.	.	E	L	E	A	Q	L	V	Q	A	E	Q	R	N	R	D	L	Q	A	D	N	Q	R	L	K	Y	E	V	E	A	L	K	E	K	L	E	H	Q
Template Known Secondary structure			S	S																																							.	.
Template Predicted Secondary structure																																											.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		98	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		S	P	G	M	S	T	.	.	D	A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		Y	A	Q	S	Y	K	Q	V	S	V	L	E	D	D	L	S	Q	T	R	A	I	K	E	Q	L	H	K	Y	V	R	E	L	E	Q	A	N	D	D	L	E	R	A	K	R	A	T	I	X	S	L	E	D	F	E	Q	R	L	N	Q	A	I	E	R	N	A	F	L	E	S	E	L	D	E	K	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions