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Job Description | P39285 | Confidence | 60.47% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 84 | Aligned Residues | 128 |
% Identity | 15% | Template | c2qihA_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:protein uspa1; |
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis
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Resolution | 1.90 Å |
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106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | N | Q | E | I | L | Q | V | S | S | Q | L | L | D | K | S | R | Q | A | Q | Q | E | Q | E | R | A | R | E | I | A | D | S | L | N | Q | L | P | Q | Q | Q | T | D | A | R | R | Q | L | N | E | I | E | R | R | L | G | T | L | T | G | N | T | P | L | N | Q | A | Q | N | F | A | L | Q | S | D | S | A | R | L | K | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | E | L | G | I | A | E | N | K | K | D | A | Q | I | A | K | A | Q | A | N | E | N | K | D | G | I | A | K | N | Q | A | D | I | Q | L | H | D | K | K | I | T | N | L | G | I | L | H | S | M | V | A | R | A | V | G | N | N | T | Q | G | V | A | T | N | K | A | D | I | A | K | N | Q | A | D | I | A | N | N | I | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
538 | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . |
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186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
L | V | D | E | L | E | L | A | Q | L | S | A | N | N | R | Q | E | L | A | R | L | R | S | E | L | A | E | K | E | S | Q | Q | L | D | A | Y | L | Q | A | L | R | N | Q | L | N | S | Q | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | I | Y | E | L | A | Q | Q | Q | D | Q | H | S | S | D | I | K | T | L | A | K | V | S | A | A | N | T | D | R | I | A | K | N | K | A | E | A | D | A | S | F | E | T | L | T | K | N | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
618 | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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