Job Description P39285 Confidence 29.04% Date Thu Jan 5 11:58:57 GMT 2012 Rank 250 Aligned Residues 101 % Identity 12% Template c2pmsD_ PDB info PDB header:metal transport, hydrolase Chain: D: PDB Molecule:pneumococcal surface protein a (pspa); PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a Resolution 2.91 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	.	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q	N	F	A	L	Q	S	D	S	A	R	L	K
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		M	D	A	E	E	V	A	P	Q	A	K	I	A	E	L	E	N	Q	V	H	R	L	E	Q	E	L	K	E	I	D	E	A	P	L	Q	S	K	L	D	A	K	K	A	K	L	S	K	L	E	E	L	S	D	K	I	D	E	L	D	A	E	I	A	K	L	E	D	Q	L	K	A	A	E	E	E	D	Y	F	K	E
Template Known Secondary structure								S																						T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	E	K	T	I	A	A	K	K	A	E	L	E	K	T	E	A	D	L	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions