Job Description P39285 Confidence 31.34% Date Thu Jan 5 11:58:57 GMT 2012 Rank 228 Aligned Residues 205 % Identity 11% Template c2odvA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:plectin 1; PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant. Resolution 2.05 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	.	.	.	.	.	N	A	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V	S	P	G	M
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		E	L	Q	L	R	W	Q	E	Y	R	E	L	V	L	L	L	L	Q	W	M	R	H	H	T	A	A	F	E	E	R	F	P	S	S	F	E	E	I	E	I	L	W	S	Q	F	L	K	F	K	E	M	E	L	P	A	K	E	A	D	K	N	R	S	K	G	I	Y	Q	S	L	E	G	A	V	Q	A	G	Q	L	K
Template Known Secondary structure																																		S	S																		T																								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
							102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	S	T	D	A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q	N	F	A	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																											.
Template Conservation																																																																	.
Template Sequence		V	P	P	G	Y	H	P	L	D	V	E	K	E	W	G	K	L	H	V	A	I	L	E	R	E	K	Q	L	R	S	E	F	E	R	L	E	A	L	Q	R	I	V	T	K	L	Q	M	E	A	G	L	A	E	E	Q	L	N	Q	A	D	A	L	L	.	Q	S	D	V	R	L	L	A	A	G	K	V	P	Q	R	A
Template Known Secondary structure				T	T		S																																																										.							T	T	T	T				S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	S	A	R	L	K	A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A	L	R	N	Q	L	N	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	E	R	D	L	D	K	A	D	S	M	I	R	L	L	F	N	D	V	Q	T	L	K	D	G	R	H	P	Q	G	E	Q	M	Y	R	R	V	Y	R	L	H	K	R	L	V	A	I	R	T	E	Y	N	L	R
Template Known Secondary structure																												T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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