Return to main results Retrieve Phyre Job Id

Job DescriptionP39285
Confidence20.25%DateThu Jan 5 11:58:57 GMT 2012
Rank461Aligned Residues63
% Identity13%Templatec2hpcH_
PDB info PDB header:blood clottingChain: H: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390.........400.........410.........420.........430.........440.........
Predicted Secondary structure 








Query SS confidence 






























































Query Sequence  RELLNSLLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQD
Query Conservation    

 

      
  

 


   


   
 



 







 
  

           
Alig confidence 






























































Template Conservation   
    
   
  
   
      
  
   
                        
      
Template Sequence  ETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKECEEIIRK
Template Known Secondary structure  TTTTTTTTTTTTTTTSTTSS








S


SSTT
Template Predicted Secondary structure 










Template SS confidence 






























































   155....160.........170.........180.........190.........200.........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions