Job Description P39285 Confidence 95.42% Date Thu Jan 5 11:58:57 GMT 2012 Rank 25 Aligned Residues 305 % Identity 10% Template c2ch7A_ PDB info PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima Resolution 2.5 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		S	K	Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	.	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V	S	P	G	M	S	T
Query Conservation																																			.
Alig confidence																																			.																																														.
Template Conservation																																																																																	.
Template Sequence		M	K	D	V	Q	T	E	T	F	S	V	A	E	S	I	E	E	I	S	K	A	N	E	E	I	T	N	Q	L	L	G	I	S	K	E	M	D	N	I	S	T	R	I	E	S	I	S	A	S	V	Q	E	T	T	A	G	S	E	E	I	S	S	A	T	K	N	I	A	D	S	A	Q	Q	A	A	S	F	A	D	.
Template Known Secondary structure		T																																																																															.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q	N	F	A	L	Q	S	D	S	A	R	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Q	S	T	Q	L	A	K	E	A	G	D	A	L	K	K	V	I	E	V	T	R	M	I	S	N	S	A	K	D	V	E	R	V	V	E	S	F	Q	K	G	A	E	E	I	T	S	F	V	E	T	I	N	A	I	A	E	Q	T	N	L	L	A	L	N	A	A	I	E	A	A	R	A	G	E	A	G	R	G	F
Template Known Secondary structure		.																																								T	T																														T	T		T	T
Template Predicted Secondary structure		.
Template SS confidence
			303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A	L	R	N	Q	L	N	S	Q	R	Q	L	E	A	E	R	A	L	E	S	T	E	L	L	A	E	N	S	A	D	L	P	K	D	I	V	A	Q	F	K
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		A	V	V	A	D	E	I	R	K	L	A	E	E	S	Q	Q	A	S	E	N	V	R	R	V	V	N	E	I	R	S	I	A	E	D	A	G	K	V	S	S	E	I	T	A	R	V	E	E	G	T	.	K	L	A	D	E	A	D	E	K	L	N	S	I	V	G	A	V	E	R	I	N	E	M	L	Q	N	I	A	A
Template Known Secondary structure																																			T	T																.		T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	R	E	L	S	A	A	L	N	Q	Q	A	Q	R	M	D	L	V	A	S	Q	Q	R	Q	A	A	S	Q	T	L	Q	V	R	Q	A	L	N	T	L	R	E	Q	S	Q	W	L	G	S	S	N	L	L	G	E	A	L	R	A	Q	V	A	R	L	P	E	M	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	E	E	Q	T	A	A	V	D	E	I	T	T	A	M	T	E	N	A	K	N	A	E	E	I	T	N	S	V	K	E	V	N	A	R	L	Q	E	I	S	A	S	T	E	E	V	T	S	R	V	Q	T	I	R	E	N	V	Q	M	L	K	E	I	V	A	R	Y	K
Template Known Secondary structure																																																												S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions