Job Description P39285 Confidence 22.85% Date Thu Jan 5 11:58:57 GMT 2012 Rank 344 Aligned Residues 78 % Identity 14% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.								.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.									.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		R	I	G	D	T	V	T	I	R	D	L	T	G	S	V	T	K	I	N	.	.	.	.	.	.	.	T	R	A	T	T	I	S	D	W	D	R	K	E	I	I	V	P	N	K	A	F	I	T	E	Q	F	I	N	W	S	L	S	D	S	V	T	R	V	V	L	T	I	P	.	.	.	.	.	.	.	.	A	P	A
Query Conservation																					.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.								.	.	.	.	.	.	.																									.	.																		.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																																							.	.
Template Sequence		R	E	G	E	I	V	A	.	.	.	.	.	G	V	I	Q	R	D	S	R	A	N	A	R	G	L	V	V	V	R	I	G	T	E	T	K	A	S	E	G	V	I	P	A	A	E	Q	V	P	G	.	.	E	S	Y	E	H	G	N	R	L	R	C	Y	V	V	G	V	T	R	G	A	R	E	P	L	I	T	L	S
Template Known Secondary structure			T	T					.	.	.	.	.												T	T								S	S	S	S								G	G	G	S		T	T	.	.					T	T														S	S	S
Template Predicted Secondary structure									.	.	.	.	.																																							.	.
Template SS confidence
		110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	N	S	E	E	V	T	E	I	L	L	T	A	A	R	R	C	S	L	V	I	D
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		R	T	H	P	N	L	V	R	K	L	F	S	L	.	.	.	E	V	P	E	I	A	D
Template Known Secondary structure		S	S												.	.	.							T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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