Job Description P39285 Confidence 23.30% Date Thu Jan 5 11:58:57 GMT 2012 Rank 323 Aligned Residues 55 % Identity 24% Template c1yceD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:subunit c; PDBTitle: structure of the rotor ring of f-type na+-atpase from ilyobacter2 tartaricus Resolution 2.40 Å

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		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.													.	.	.	.	920	.	.	.	.	.																.	.	.	.	930	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	M	L	I	G	G	L	V	G	F	S	M	I	G	I	E	W	S	K	L	Q	W	L	V	A	A	L	G	V	G	L	G	F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	I	F	A	N	F	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	I	L	F	E	K
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	F	A	K	T	V	V	L	A	A	S	A	V	G	A	G	T	A	M	I	A	G	I	G	P	G	V	G	Q	G	Y	A	A	G	K	A	V	E	S	V	A	R	Q	P	E	A	K	G	D	I	I	S	T	M	V	L	G	Q	A	V	A	E	S	T	G	I	Y	S	L	V	I	A	L	I	L	L	Y	A	N
Template Known Secondary structure																					G	G	G	G																						G	G	G																																S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		933	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		83	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions